Stage Top Incubator

Culture cells on top of the microscope stage for long periods

Accurate temperature control

Keep your cells at 37°C ± 0.5°C outside the CO2 incubator

High quality image gathering

Bottom glass window can be adjusted to your microscopy needs

Up to 3 simultaneous cell cultures

Test different conditions in the same system

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Stage top incubator setup

The stage top incubator is compact and can be easily manipulated to be put on a microscope while maintaining dynamic perfusion and temperature control. The stage-leading incubator can hold up to 3 chips simultaneously and can easily be stacked for parallelization.

stage top incubator schematics

A stage top incubator pack contains:

Flow sensor (Galileo, MIC)

Software (Galileo user interface)

Stage top incubator

Flow controller

Several Eppendorf or Falcon reservoirs

Tubings and luers

Microfluidic chips, if needed

User guide

The flow controller performs the media flow for dynamic perfusion, which applies pressure to the reservoirs to induce the flow. A flow sensor is then added to the setup with a feedback loop to the flow controller that allows maintenance of reasonable control of the flow rate inside the stage top incubator during the experiment.

 

This pack can be combined with microfluidic functions like recirculationsequential injection, bubble trapping, cell-cell interaction monitoring, etc.

 

Our Research & Innovation team is exploring this product. Contact our experts if you are interested in it, its applications, or possible variations to better suit your needs!

Static live cell imaging: Microglial cell culture

According to the protocol published by Sepulveda et al., Glia, 2016, primary microglial cells were isolated from mice pups’ brains.

Primary mouse microglial cells were prepared and kindly provided by Patrick P. Michel and Rocio Gimenez from the Brain and Spine Institute in the frame of the LOCAI project.

 

Cells were passaged after one week of isolation onto Ibidi chips (µ-Slide III 3D Perfusion, cat. 80376) at 150 000 cells/mL density. Cell medium was supplemented with FBS and PS. HEPES in powder was added to a final concentration of 20 mM. Once the HEPES dissolved, the pH was corrected and brought to 7.2 using Na 1 N, and then the media was filtered using a 0,22 filter. Cells were left to attach overnight in an incubator at 37°C and 5% CO2.

Hardware

Flow sensor (Galileo, MIC)

Flow controller

Tubings (1/32″ ID), fittings and reservoirs

IBIDI µ-Slide III 3D perfusion

8 cm of 100 µm inner diameter microfluidic resistance

Microfluidic male and female Luer to ¼” -28 connectors

Laminar flow hood

Standard Incubator for cell attachment, stage top Incubator for experiment

Chemicals

Dulbecco’s modified Eagle’s medium (DMEM)

Penicillin/Streptomycin, 10,000 U/ml, 10mg/ml Streptomycin, PAN biotech

FBS, 0.2 µm sterile filtered, PAN Biotech

HEPES is used to buffer pH in the absence of CO2 control.

Software

Galileo user interface

Thermal chamber software

Design of the chip

Components Specifications
Interface typeFemale Luer
Well diameter5.5 mm
Well height1.7 mm
Volume per well30 μl
MaterialLbidi Polymer Coverslip
Surface treatmentBitrate
Growth area per well25 mm2

As a proof-of-concept of the efficacy of the stage top incubator in maintaining ideal conditions for live cell imaging, primary mouse microglial cells were cultured in static conditions for 48h inside it. The figure below show the results after 8h and 48h of stimulation with LPS.

microglial-cell
Figure 1. Mouse microglial cells seeded in a µ-slide III 3D perfusion chip well and maintained in the stage top incubator on the microscope under static conditions for 8 hours after LPS stimulation. Cells were challenged with 10 ng/mL LPS at t = 0 h (a). Micrographs in phase contrast were acquired every 30 minutes for 8 hours (b). The micrographs correspond to the same observation field.
LPS Static T0h 48h microglia cells v2-1
Figure 2. Mouse microglial cells seeded in a µ-slide III 3D perfusion chip well and maintained in the stage top incubator under static conditions for 48 hours after LPS stimulation. Cells were challenged with 10 ng/mL LPS at t = 0 h. Microglial cell cultures at t = 0 h (a) and cells at t = 48 h (b) after LPS addition. The micrographs correspond to different observation fields.

Dynamic live cell imaging: HEK293 cells under flow

Downscaling cell cultures to the organ-on-chip technology implies that heat and mass transfer much faster and more efficiently in or out of the chip. This allows the media to reach the right temperature quickly after entering the Stage Top Incubator, even at high flow rates.

HEK293 cells were maintained in standard cell biology practices, with passages twice weekly.

Hardware

Flow sensor (Galileo, MIC)

Flow controller

Tubings (1/32″ ID), fittings and reservoirs

IBIDI µ-Slide Luer – 400 µm in height (permeable, polymer coverslip, and impermeable, glass coverslip

10 cm of 175 µm inner diameter microfluidic resistance

Microfluidic male and female Luer to ¼”-28 connectors

Laminar flow hood

Standard Incubator for cell attachment, stage top Incubator for experiment

pH optical sensor, in-house developed flow cell

Chemicals

Dulbecco’s modified Eagle’s medium (DMEM)

Penicillin/Streptomycin, 10,000 U/ml, 10mg/ml Streptomycin, PAN biotech

Software

Galileo user interface

Thermal chamber software

Design of the chip

Gas impermeable – Glass Coverslip

Components Specifications
Outer dimensions (w x l)25.5 x 75.5 mm² 
Channel length50 mm
Channel width5 mm
Adapters Female Luer
Volume per reservoir60 μl
Growth area2.5 cm2
 Bottom: Glass coverslip No. 1.5H, selected quality, 170 µm +/- 5 µm

Gas permeable – Polymer Coverslip

Components Specifications
Outer dimensions (w x l)25.5 x 75.5 mm²
Channel length50 mm
Channel width5 mm
AdaptersFemale Luer
Volume per reservoir60 μl
Growth area2.5 cm2
Coating area5.2 / 5.4 / 5.6 / 5.8 cm2
 Bottom: IBIDI polymer coverslip

The stage top incubator was used to culture HEK293 cells under flow on the microscope stage for 60 hours. The pH was continuously monitored, and images were taken at defined time points. The gas permeability of the chips was assessed to understand the influence of lack of CO2 control on cell culture outside the CO2 incubator. Cells grew and multiplied in both conditions, with the impenetrable chip showing more considerable pH variations without negatively impacting cell doubling.

stage top incubator application
Figure 3. Microfluidic culture of HEK293 cells in the Stage top incubator with continuous pH monitoring. a. pH measurements of gas impermeable and permeable chips during cell culture. Measurements of cells cultured in the impermeable chip showed larger pH variations than those in the gas-permeable chip. b. Bright-field images of cells during culture at defined time points. Initial cell concentrations: permeable chip: 2.43×106 cells/ml; impermeable chip: 1.9×106 cells/ml. Scale bars, 100 µm.

Stage top incubator specifications

The Stage Top Incubator was designed to allow cell culture on top of the microscope stage for live cell imaging. As the animation shows, it will enable homogenous temperature transfer across its working area.

 

The solutions are thermalized as they enter the chip, keeping a homogenous temperature throughout. Thus, solutions can be preheated at the desired temperature before entering the chip.

Stage top incubator temperature illustration

The table below summarizes its main specifications.

CharacteristicsSpecifications
Dimensions (mm)30.5 x 130 x 168 (h x w x l)
Base K- Frame3.5 x 110 x 160 (h x w x l)
Dimensions of internal usable space25 X 89 x 130 (h x w x l)
Dimensions of the bottom glass (ITO glass)

1) 72 X 110 with a thickness of 1.1 mm

2) 50 x 25 with a thickness of 0.6mm

3) 50 x 22 with a thickness of 0.12 mm

Temperature rangeRoom temperature to 70 oC
Temperature accuracy± 0,5 oC
External materialAluminum and ITO glass

The stage top incubator is controlled by a converter connected to software (both included). Also, it is compatible with 1/16″ and 1/32″ ID tubing.

stage top incubator back view

Customize your stage top incubator

Several commercialized and laboratory-made microfluidic chips have been developed and tested recently to perform dynamic cell cultures efficiently. We can include one of them with different surface modifications inside the pack. A chip can also have several separate channels.

 

Our products and packs are fully customizable to fit your needs perfectly. Our microfluidic specialists and researchers will help you choose the best instruments and accessories and accompany you during the setup of the microfluidic platform until you can obtain your first experimental results.

 

Contact our experts to answer any questions about this stage top incubator for microfluidics pack and how it can match your specifications!

Frequently asked questions

Can the stage top incubator be sterilized?

Yes, we have developed a simple protocol for sterilization and cleaning that is provided along with the user guide.

The Stage Top Incubator was designed to be kept outside the CO2 incubator, but it can be adapted on demand.

No, the Stage Top Incubator allows gas exchange with the atmosphere.

No, the reservoirs can be kept at room temperature. The Stage Top Incubator was designed to ensure that the media reaches the cells at the desired temperature regardless of the temperature of the reservoirs.

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Funding and Support

The Protomet, ACDC, and LOCAI projects results helped develop this instrument pack, with funding from 

the European Union’s Horizon 2020 MSCA-ITN under grant agreement No 813873 (ProtoMet),

the European Union’s Horizon 2020 research and innovation program under grant agreement No 824060 (ACDC project), 

and French National Research Agency (ANR) and the German Federal Ministry of Education and Research (BMBF) in the frame of the 1st German-French Joint Call for proposals on Artificial Intelligence.

Products & Associated Accessories

FAQ - Stage Top Incubator

What is the Stage Top Incubator used for?

It is a small incubation chamber that fits directly on a microscope’s stage. It is meant for live cell culture, but without the hassle of moving samples from an incubator to the microscope. Its main use is for live cell imaging over a long period of time, without the hassle of moving samples from an incubator to the microscope. This is particularly useful for a static imaging setup, where media exchange can affect the results of an experiment. This device, on the other hand, allows for media flow during an experiment, allowing cells to remain perfused as you observe.

It can achieve a temperature range of ambient up to 70°C, with an accuracy of ±0.5°C. This includes maintaining a temperature of 37°C with the same level of accuracy, which is ideal for most cell culture.

The k-frame base is 3.5mm high, 110mm wide, and 160mm long, while the entire device is 30.5mm high, 130mm wide, and 168mm long. The internal space is 25mm high, 89mm wide, and 130mm long. This allows it to sit directly on a microscope’s stage without getting in the way of the optical path. This is particularly useful, as it is also possible for multiple units of the device to be placed on the microscope’s stage, allowing for multiple experiments at once.

The stage top incubator has the capacity for the incubation of up to three microfluidic chips at once. This minimizes variability that could otherwise arise as a result of conducting experiments on different days and with different equipment. This is because the stage top incubator allows for the incubation of three cell culture conditions at once.

The options for the bottom glass are:

  • 50 x 25 mm, 0.6 mm thick
  • 50 x 22 mm, 0.12 mm thick
  • 72 x 110 mm, 1.1 mm thick

The type of bottom glass matters for the quality of the imaging. For experiments requiring a standard No. 1.5 thickness coverslip, the thinnest option is the appropriate choice.
The options for the bottom glass are:

  • 50 x 25 mm, 0.6 mm thick
  • 50 x 22 mm, 0.12 mm thick
  • 72 x 110 mm, 1.1 mm thick

The type of bottom glass matters for the quality of the imaging. For experiments requiring a standard No. 1.5 thickness coverslip, the thinnest option is the appropriate choice.

The stage top incubator does not control the composition of the gas. The stage top incubator is not gas-tight and allows for free exchange of gases with the ambient environment. As shown in the microglial cell culture experiment conducted in the product page, the use of a HEPES buffer in the cell culture medium is a known workaround for the absence of CO2 buffering capacity. 

The stage top incubator is intended for use outside the CO2 incubator. It is possible for the stage top incubator to be customized for use inside the incubator. Researchers requiring this capability are advised to contact us for more information.

The stage top incubator does not control the composition of the gas. The stage top incubator is not gas-tight and allows for free exchange of gases with the ambient environment. As shown in the microglial cell culture experiment conducted in the product page, the use of a HEPES buffer in the cell culture medium is a known workaround for the absence of CO2 buffering capacity. 

The Stage Top Incubator is available with 1/16″ and 1/32″ inner diameters, which are the most commonly used microfluidic tube diameters in the lab. The device can be extended with features such as media recirculation, sequential injection, bubble trapping, as well as the monitoring of cell-cell interactions, in addition to the basic perfusion mode.

A basic package of the Stage Top Incubator comes with a Galileo Flow sensor, Galileo user interface software, the Stage Top Incubator, a Flow controller, Eppendorf or Falcon reservoirs, tubing, luer fittings, microfluidic chips (if required), as well as a user manual.

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